context("make_bipartite_graph")
test_that("make_bipartite_graph works", {
library(igraph)
I <- matrix(sample(0:1, 35, replace=TRUE, prob=c(3,1)), ncol=5)
g <- graph_from_incidence_matrix(I)
edges <- unlist(sapply(seq_len(nrow(I)), function(x) {
w <- which(I[x,] != 0) + nrow(I)
if (length(w)!=0) { as.vector(rbind(x, w)) } else { numeric() }
}))
g2 <- make_bipartite_graph(seq_len(nrow(I)+ncol(I)) > nrow(I), edges)
I2 <- as_incidence_matrix(g2)
expect_that(I2, is_equivalent_to(I))
})
test_that("make_bipartite_graph works with vertex names", {
types <- c(0, 1, 0, 1, 0, 1)
names(types) <- LETTERS[1:length(types)]
edges <- c("A", "B", "C", "D", "E", "F", "A", "D", "D", "E", "B", "C", "C", "F")
g <- make_bipartite_graph(types, edges)
expect_that(V(g)$name, is_equivalent_to(c("A", "B", "C", "D", "E", "F")))
expect_that(V(g)$type, is_equivalent_to(c(FALSE, TRUE, FALSE, TRUE, FALSE, TRUE)))
expect_error(make_bipartite_graph(types, c(edges, "Q")), "edge vector contains a vertex name that is not found")
})
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